Group of Computational&Comparative,Evolutionary and Functional Genomics(CEFG)

Software

Geptop: A tool to find essential genes from genome sequence based on orthology and phylogeny.

Zisland Explorer: A tool of detecting genomic islands by combining the homogeneity and heterogeneity properties.

CEG_match: A web tool for predicting essential genes based on cluster model.

ZCURVE 3.0: An ab initio program for gene finding in bacterial or archaeal genomes.

Zfisher: An online tool to check dubious hypothetical genes in annotated bacterial and archaeal genomes.

 

Databases

SMAL: A resource of spontaneous mutation accumulation lines.

CEG: A database of essential gene clusters.

IFIM: A database of integrated fitness information for microbial genes.

SSER: Species specific essential reactions database.

 

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